Vol. 11, Issue 4 (2022)

Author(s):
R Anantapur, R Mohan, A Peter, SG Bhat and Kiran NR

Abstract:
Mungbean yellow mosaic virus (MYMV) is a devastating virus in green gram cultivation. The Replicase initiation (Rep) / AC1 protein is encoded by Rep gene from DNA A of bipartite viral genome of MYMV. The Rep protein is important among all as it is involved in replication and multiplication of virus in host system. The 3D structure prediction, quality assessment and model validation were done by different online molecular web tools. The 3D structure was developed Ab-initio, simultaneously refinement of the model was done, followed by assessment of the quality of the Rep protein by studying the stereo chemical properties. Physiochemical properties and amino acid content were also studied.